Conda Command Cheat Sheet¶
Commonly used conda commands:
conda | Description |
---|---|
conda create -n <conda env name> or conda create -n <conda env name> <software name> |
Create a new conda environment. You can include other flags to customize the environment more and install software in the conda environment. For example, conda create -n fastqc_env fastqc will install the FastQC program into a conda environment called fastqc_env . |
conda env create -n <conda env name> -f <yaml file> |
Create a new conda environment using specifications from a yaml file. For example, conda env create -n test -f environment.yml . |
conda install -y <software name> |
Install software in conda environment |
conda activate <conda env name> |
Activate conda environment |
conda deactivate |
Deactivate conda environment |
conda info --envs or conda env list |
Both commands list conda environments, * will be next to the environment you are currently in |
conda list -n <conda env name> |
List software installed in this conda environment. Or simply, conda list . |
conda info |
Information about your conda environment |
conda search <software name> |
Search for available software versions |
conda env remove --name <conda env name> |
Remove a conda environment |
Download the official conda cheat sheet for more commands
Last update: April 2, 2021